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Week-1 Basic camp

 

Morning Batch (Replicate 1)

Check-in:       8:45 - 9:00am Everyday

Check-out:     12:00pm Everyday

 Afternoon Batch (Replicate 2)

Check-in:    12:45-1:00pm Everyday

Check-out:    4:00pm Everyday

 

Day & Date

Morning Camp

Afternoon Camp

Activity

Lead / Instructors

Location

Day-1

Mon

 

Aug 7, 2017

9:00 - 9:15

1:00 - 1:15

Camp Overview

Jaiswal/ Naithani

Cordley 3077

9:15 - 9:45

1:15 - 1:45

Safety and Pipetting (using dyes)

Jaiswal/ Noor, Austin, Matthew

Parul

9:45 -10:45

1:45 -2:45

Central Dogma and Genetic Material

(hands on activity on DNA modeling exercise, transcription and translation)

Laurel,

Austin,

Parul,

Sushma

Matthew

10:45 - 11:00

2:45 - 3:00

Break and Snacks

 

Hallway

11:00 - 12:00

3:00 - 4:00

Introduction to Agrobacterium & Microbiomes

 

GMOs, microbiomes, and collect gall samples

Chang / Elizabeth and Alex

Cordley 3077

 

Day-2

Tue

 

Aug 8, 2017

9:00 - 9:05

1:00 - 1:05

Review of Day 1 & Questions?

Jaiswal

Cordley 3077

9:05 - 9:45

1:05 - 1:45

Pipetting (lesson two)

Noor, Matthew, Austin

Parul

9:45 - 10:45

1:45 - 2:45

Plant DNA isolation

Noor,

Matthew,

Parul, Austin

10:45 - 11:00

2:45 - 3:00

Break and Snacks

 

Hallway

11:00 -12:00

3:00 - 4:00

Bacterial DNA isolation

Chang / Alex,

Elizabeth

Cordley 3077

 

Day-3

Wed

 

Aug 9, 2017

9:00 -9:05

1:00 -1:05

Review of Day 2 & Questions?

Alex,

Noor

Austin

Cordley 3077

9:05 - 9:30

1:05 - 1:30

Polymerase Chain Reaction (PCR). Amplify genetic markers (SSR) containing DNA segment from various varieties of rice.

Jaiswal /, Parul, Austin

Matthew

Noor

9:30 - 10:15

1:30 - 2:15

Preparation of bacterial DNA library for whole genome sequencing

Chang / Alex & Elizabeth

Cordley 3077

10:15 - 10:30

2:15 - 2:30

Break and Snacks

 

Hallway

10:30 - 12:00

2:30 - 4:00

Maize genetic exercise (Hands on activity on Mendelian Genetics and transposons)

Fowler/ John

Sushma

Laurel

Cordley 3077

 

Day-4

Thu

 

Aug 10, 2017

9:00 - 9:05

1:00 -1:05

Review of Day 3 & Questions?

Alex, Laurel, Austin

Pankaj

Cordley 3077

9:05 - 9:30

1:05 - 1:30

PCR gel (mock) loading practice

Chang /Jaiswal

Noor Elizabeth

9:30 - 10:00

1:30 - 2:00

 

PCR gel loading

Jaiswal / Noor, Parul, Austin,

Matthew

10:00 - 10:30

2:00 - 2:30

Tour of the Center for Genome Research and Biocomputing (CGRB)-

Form 2 groups

Jaiswal/ (group-1)-Laurel (group-2)-Parul

ALS-CGRB

10:30 - 10:45

2:30 - 2:45

Break and Snacks

 

Hallway

10:45 - 12:00

2:45 - 4:00

DNA Modeling Exercise on Mutations, SSRs/markers (effects on Transcription &Translation )

Jaiswal/ Austin, Noor,

Parul

 
 

Day-5

Friday

 

Aug 11, 2017

9:00 - 9:05

1:00 - 1:05

Review of Day 4 & Questions?

Elizabeth, Noor, Austin

Cordley 3077

 

9:05-10:00

1:05 - 2:00

Visualize the amplified DNA fragment on a gel find genotype differences

Chang/ Elizabeth

Jaiswal / Noor, Parul

Visualize results of genetic transformation of plants and Group Discussion

Chang / Elizabeth

Sushma

Pankaj

10:00 - 10:15

2:00 - 2:15

Break and Snacks

 

Hallway

10:15 - 12:00

2:15-4:00

Informatics- based analysis for DNA and Protein in biology -webtools

Jeff Anderson, Justin,  Matthew

Megan

Cordley 4056

12:00 - 12:45

N/A

PIZZA Lunch (for both morning and afternoon participants)

Meet Scientists, Questions, Certificates, Conclusion

All folks (week-1) + campers

Cordley 2087

 

N/A

4:00pm

Pickup boxed dinner (only afternoon camp) and depart for Portland

 

Cordley 3077